Gcloud with start up script on jupyter

Help
1

I’m trying to copy some files from one terra gcp bucket to a computational environment that I spin up. I’m trying to use the command (made up bucket id)

gcloud storage cp --recursive "gs://fc-1111-111-1111-111111/module_data/module_1/part2" /home/jupyter

this ins’t the same bucket that the workspace is in, but a bucket I have access to. It works well with RStudio using something like

gcloud storage cp --recursive "gs://fc-1111-111-1111-111111/module_data/module_1/part2" /home/rstudio

I’ve noticed some differences in Rstudio and jupyter in permission access and I have tried stuff like

cd /home/jupyter
mkdir data
chmod -R ug+rw data
gcloud storage cp --recursive "gs://fc-1111-111-1111-111111/module_data/module_1/part2" /home/jupyter/data
chmod -R ug+rw data

Is there a difference using gcloud on Rstudio vs Jupyter? Is there an example of using a start up script using gcloud storage cp on jupyter?

Thanks!

2

Hi @camancuso

I’ve noticed some differences in Rstudio and jupyter in permission access

Could you elaborate on this? Is this affecting you in a specific way?

You should not expect any differences as long as gcloud version is the same for both images. The only case for a potential difference could come in regards to different base images, i.e. Ubuntu 20 vs Ubuntu 22.

Javier